Index _ | A | B | C | D | E | F | G | H | I | K | L | M | N | O | P | R | S | T | U | V | W | X | Y | Z _ __call__() (diffsims.utils.probe_utils.BesselProbe method) (diffsims.utils.probe_utils.ProbeFunction method) A acceleration_voltage_to_relativistic_mass() (in module diffsims.utils.sim_utils) acceleration_voltage_to_velocity() (in module diffsims.utils.sim_utils) acceleration_voltage_to_wavelength() (in module diffsims.utils.sim_utils) add_dead_pixels() (in module diffsims.pattern.detector_functions) add_detector_offset() (in module diffsims.pattern.detector_functions) add_gaussian_noise() (in module diffsims.pattern.detector_functions) add_gaussian_point_spread() (in module diffsims.pattern.detector_functions) add_linear_detector_gain() (in module diffsims.pattern.detector_functions) add_shot_and_point_spread() (in module diffsims.pattern.detector_functions) add_shot_noise() (in module diffsims.pattern.detector_functions) allowed (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) angle_with() (diffsims.crystallography.ReciprocalLatticeVector method) atanc() (in module diffsims.utils.shape_factor_models) AtomicDiffractionGenerator (class in diffsims.generators.diffraction_generator) azimuth (diffsims.crystallography.ReciprocalLatticeVector property) B beam_directions_grid_to_euler() (in module diffsims.generators.sphere_mesh_generators) BesselProbe (class in diffsims.utils.probe_utils) beta_to_bst() (in module diffsims.utils.sim_utils) binary() (in module diffsims.utils.shape_factor_models) bst_to_beta() (in module diffsims.utils.sim_utils) C calculate_ed_data() (diffsims.generators.diffraction_generator.AtomicDiffractionGenerator method) (diffsims.generators.diffraction_generator.DiffractionGenerator method) calculate_profile_data() (diffsims.generators.diffraction_generator.DiffractionGenerator method) calculate_structure_factor() (diffsims.crystallography.ReciprocalLatticePoint method) (diffsims.crystallography.ReciprocalLatticeVector method) calculate_theta() (diffsims.crystallography.ReciprocalLatticePoint method) (diffsims.crystallography.ReciprocalLatticeVector method) calibrated_coordinates (diffsims.sims.diffraction_simulation.DiffractionSimulation property) calibration (diffsims.sims.diffraction_simulation.DiffractionSimulation property) constrain_to_dynamic_range() (in module diffsims.pattern.detector_functions) convolve() (in module diffsims.utils.fourier_transform) coordinate_format (diffsims.crystallography.ReciprocalLatticeVector property) coordinates (diffsims.crystallography.ReciprocalLatticeVector property) (diffsims.sims.diffraction_simulation.DiffractionSimulation property) corners_to_centroid_and_edge_centers() (in module diffsims.generators.zap_map_generator) cross() (diffsims.crystallography.ReciprocalLatticeVector method) D data (diffsims.crystallography.ReciprocalLatticeVector property) deepcopy() (diffsims.crystallography.ReciprocalLatticeVector method) (diffsims.sims.diffraction_simulation.DiffractionSimulation method) diffraction_generator (diffsims.libraries.diffraction_library.DiffractionLibrary attribute) diffraction_scattering_angle() (in module diffsims.utils.sim_utils) DiffractionGenerator (class in diffsims.generators.diffraction_generator) DiffractionLibrary (class in diffsims.libraries.diffraction_library) DiffractionLibraryGenerator (class in diffsims.generators.library_generator) DiffractionSimulation (class in diffsims.sims.diffraction_simulation) DiffractionVectorLibrary (class in diffsims.libraries.vector_library) diffsims.crystallography module diffsims.generators module diffsims.generators.diffraction_generator module diffsims.generators.library_generator module diffsims.generators.rotation_list_generators module diffsims.generators.sphere_mesh_generators module diffsims.generators.zap_map_generator module diffsims.libraries module diffsims.libraries.diffraction_library module diffsims.libraries.structure_library module diffsims.libraries.vector_library module diffsims.pattern.detector_functions module diffsims.sims module diffsims.sims.diffraction_simulation module diffsims.structure_factor module diffsims.utils module diffsims.utils.atomic_diffraction_generator_utils module diffsims.utils.atomic_scattering_params module diffsims.utils.discretise_utils module diffsims.utils.fourier_transform module diffsims.utils.generic_utils module diffsims.utils.kinematic_simulation_utils module diffsims.utils.lobato_scattering_params module diffsims.utils.probe_utils module diffsims.utils.scattering_params module diffsims.utils.shape_factor_models module diffsims.utils.sim_utils module diffsims.utils.vector_utils module dim (diffsims.crystallography.ReciprocalLatticeVector attribute) direct_beam_mask (diffsims.sims.diffraction_simulation.DiffractionSimulation property) do_binning() (in module diffsims.utils.discretise_utils) dot() (diffsims.crystallography.ReciprocalLatticeVector method) dot_outer() (diffsims.crystallography.ReciprocalLatticeVector method) draw_circle() (diffsims.crystallography.ReciprocalLatticeVector method) dspacing (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) E et_to_beta() (in module diffsims.utils.sim_utils) extend() (diffsims.sims.diffraction_simulation.DiffractionSimulation method) F fast_abs() (in module diffsims.utils.fourier_transform) fast_fft_len() (in module diffsims.utils.fourier_transform) fftn() (in module diffsims.utils.fourier_transform) fftshift_phase() (in module diffsims.utils.fourier_transform) find_asymmetric_positions() (in module diffsims.structure_factor) flatten() (diffsims.crystallography.ReciprocalLatticeVector method) from_crystal_systems() (diffsims.libraries.structure_library.StructureLibrary class method) from_highest_hkl() (diffsims.crystallography.ReciprocalLatticePoint class method) (diffsims.crystallography.ReciprocalLatticeVector class method) from_miller() (diffsims.crystallography.ReciprocalLatticeVector class method) from_min_dspacing() (diffsims.crystallography.ReciprocalLatticePoint class method) (diffsims.crystallography.ReciprocalLatticeVector class method) from_orientation_lists() (diffsims.libraries.structure_library.StructureLibrary class method) from_recip() (in module diffsims.utils.fourier_transform) FT() (diffsims.utils.probe_utils.BesselProbe method) (diffsims.utils.probe_utils.ProbeFunction method) G generate_directional_simulations() (in module diffsims.generators.zap_map_generator) generate_zap_map() (in module diffsims.generators.zap_map_generator) get_angle_cartesian() (in module diffsims.utils.vector_utils) get_angle_cartesian_vec() (in module diffsims.utils.vector_utils) get_as_mask() (diffsims.sims.diffraction_simulation.DiffractionSimulation method) get_atomic_scattering_factors() (in module diffsims.utils.sim_utils) get_atomic_scattering_parameters() (in module diffsims.structure_factor) get_atoms() (in module diffsims.utils.discretise_utils) get_beam_directions_grid() (in module diffsims.generators.rotation_list_generators) get_circle() (diffsims.crystallography.ReciprocalLatticeVector method) get_cube_mesh_vertices() (in module diffsims.generators.sphere_mesh_generators) get_DFT() (in module diffsims.utils.fourier_transform) get_diffraction_image() (in module diffsims.utils.atomic_diffraction_generator_utils) (in module diffsims.utils.kinematic_simulation_utils) get_diffraction_library() (diffsims.generators.library_generator.DiffractionLibraryGenerator method) get_diffraction_pattern() (diffsims.sims.diffraction_simulation.DiffractionSimulation method) get_discretisation() (in module diffsims.utils.discretise_utils) get_doyleturner_atomic_scattering_factor() (in module diffsims.structure_factor) get_doyleturner_structure_factor() (in module diffsims.structure_factor) get_electron_wavelength() (in module diffsims.utils.sim_utils) get_element_id_from_string() (in module diffsims.structure_factor) get_equivalent_hkl() (in module diffsims.crystallography) get_fundamental_zone_grid() (in module diffsims.generators.rotation_list_generators) get_grid() (in module diffsims.utils.generic_utils) get_grid_around_beam_direction() (in module diffsims.generators.rotation_list_generators) get_highest_hkl() (in module diffsims.crystallography) get_hkl() (in module diffsims.crystallography) get_hkl_sets() (diffsims.crystallography.ReciprocalLatticeVector method) get_holz_angle() (in module diffsims.utils.sim_utils) get_icosahedral_mesh_vertices() (in module diffsims.generators.sphere_mesh_generators) get_intensities_params() (in module diffsims.utils.sim_utils) get_interaction_constant() (in module diffsims.utils.sim_utils) get_kinematical_atomic_scattering_factor() (in module diffsims.structure_factor) get_kinematical_intensities() (in module diffsims.utils.sim_utils) get_kinematical_structure_factor() (in module diffsims.structure_factor) get_library_entry() (diffsims.libraries.diffraction_library.DiffractionLibrary method) get_library_size() (diffsims.libraries.structure_library.StructureLibrary method) get_list_from_orix() (in module diffsims.generators.rotation_list_generators) get_local_grid() (in module diffsims.generators.rotation_list_generators) get_plot() (diffsims.sims.diffraction_simulation.ProfileSimulation method) get_points_in_sphere() (in module diffsims.utils.sim_utils) get_random_sphere_vertices() (in module diffsims.generators.sphere_mesh_generators) get_recip_points() (in module diffsims.utils.fourier_transform) get_refraction_corrected_wavelength() (in module diffsims.structure_factor) get_rotation_from_z_to_direction() (in module diffsims.generators.zap_map_generator) get_scattering_params_dict() (in module diffsims.utils.sim_utils) get_unique_families() (in module diffsims.utils.sim_utils) get_uv_sphere_mesh_vertices() (in module diffsims.generators.sphere_mesh_generators) get_vector_library() (diffsims.generators.library_generator.VectorLibraryGenerator method) get_vectorized_list_for_atomic_scattering_factors() (in module diffsims.utils.sim_utils) GLOBAL_BOOL (class in diffsims.utils.generic_utils) grid2sphere() (in module diffsims.utils.atomic_diffraction_generator_utils) (in module diffsims.utils.kinematic_simulation_utils) gspacing (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) H h (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) has_hexagonal_lattice (diffsims.crystallography.ReciprocalLatticeVector property) hkil (diffsims.crystallography.ReciprocalLatticeVector property) hkl (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) I i (diffsims.crystallography.ReciprocalLatticeVector property) identifiers (diffsims.libraries.diffraction_library.DiffractionLibrary attribute) (diffsims.libraries.structure_library.StructureLibrary attribute) (diffsims.libraries.vector_library.DiffractionVectorLibrary attribute) ifftn() (in module diffsims.utils.fourier_transform) indices (diffsims.sims.diffraction_simulation.DiffractionSimulation property) intensities (diffsims.sims.diffraction_simulation.DiffractionSimulation property) is_lattice_hexagonal() (in module diffsims.utils.sim_utils) K k (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) L l (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) linear() (in module diffsims.utils.shape_factor_models) load_DiffractionLibrary() (in module diffsims.libraries.diffraction_library) load_VectorLibrary() (in module diffsims.libraries.vector_library) lorentzian() (in module diffsims.utils.shape_factor_models) lorentzian_precession() (in module diffsims.utils.shape_factor_models) M module diffsims.crystallography diffsims.generators diffsims.generators.diffraction_generator diffsims.generators.library_generator diffsims.generators.rotation_list_generators diffsims.generators.sphere_mesh_generators diffsims.generators.zap_map_generator diffsims.libraries diffsims.libraries.diffraction_library diffsims.libraries.structure_library diffsims.libraries.vector_library diffsims.pattern.detector_functions diffsims.sims diffsims.sims.diffraction_simulation diffsims.structure_factor diffsims.utils diffsims.utils.atomic_diffraction_generator_utils diffsims.utils.atomic_scattering_params diffsims.utils.discretise_utils diffsims.utils.fourier_transform diffsims.utils.generic_utils diffsims.utils.kinematic_simulation_utils diffsims.utils.lobato_scattering_params diffsims.utils.probe_utils diffsims.utils.scattering_params diffsims.utils.shape_factor_models diffsims.utils.sim_utils diffsims.utils.vector_utils multiplicity (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) N ndim (diffsims.crystallography.ReciprocalLatticeVector property) normalise() (in module diffsims.utils.atomic_diffraction_generator_utils) (in module diffsims.utils.kinematic_simulation_utils) O orientations (diffsims.libraries.structure_library.StructureLibrary attribute) P pickle_library() (diffsims.libraries.diffraction_library.DiffractionLibrary method) (diffsims.libraries.vector_library.DiffractionVectorLibrary method) plan_fft() (in module diffsims.utils.fourier_transform) plan_ifft() (in module diffsims.utils.fourier_transform) plot() (diffsims.sims.diffraction_simulation.DiffractionSimulation method) polar (diffsims.crystallography.ReciprocalLatticeVector property) precess_mat() (in module diffsims.utils.atomic_diffraction_generator_utils) (in module diffsims.utils.kinematic_simulation_utils) print_table() (diffsims.crystallography.ReciprocalLatticeVector method) ProbeFunction (class in diffsims.utils.probe_utils) ProfileSimulation (class in diffsims.sims.diffraction_simulation) R radial (diffsims.crystallography.ReciprocalLatticeVector property) rebin() (in module diffsims.utils.discretise_utils) reciprocal_radius (diffsims.libraries.diffraction_library.DiffractionLibrary attribute) (diffsims.libraries.vector_library.DiffractionVectorLibrary attribute) ReciprocalLatticePoint (class in diffsims.crystallography) ReciprocalLatticeVector (class in diffsims.crystallography) reshape() (diffsims.crystallography.ReciprocalLatticeVector method) rotate_shift_coordinates() (diffsims.sims.diffraction_simulation.DiffractionSimulation method) S sanitise_phase() (diffsims.crystallography.ReciprocalLatticeVector method) scatter() (diffsims.crystallography.ReciprocalLatticeVector method) scattering_angle_to_lattice_parameter() (in module diffsims.utils.sim_utils) scattering_parameter (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) set() (diffsims.utils.generic_utils.GLOBAL_BOOL method) shape (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) simulate_kinematic_scattering() (in module diffsims.utils.sim_utils) sin2c() (in module diffsims.utils.shape_factor_models) sinc() (in module diffsims.utils.shape_factor_models) size (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) (diffsims.sims.diffraction_simulation.DiffractionSimulation property) squeeze() (diffsims.crystallography.ReciprocalLatticeVector method) stack() (diffsims.crystallography.ReciprocalLatticeVector class method) structure_factor (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) StructureLibrary (class in diffsims.libraries.structure_library) structures (diffsims.libraries.diffraction_library.DiffractionLibrary attribute) (diffsims.libraries.structure_library.StructureLibrary attribute) (diffsims.libraries.vector_library.DiffractionVectorLibrary attribute) symmetrise() (diffsims.crystallography.ReciprocalLatticePoint method) (diffsims.crystallography.ReciprocalLatticeVector method) T tesla_to_am() (in module diffsims.utils.sim_utils) theta (diffsims.crystallography.ReciprocalLatticePoint property) (diffsims.crystallography.ReciprocalLatticeVector property) to_mesh() (in module diffsims.utils.generic_utils) to_miller() (diffsims.crystallography.ReciprocalLatticeVector method) to_polar() (diffsims.crystallography.ReciprocalLatticeVector method) to_recip() (in module diffsims.utils.fourier_transform) transpose() (diffsims.crystallography.ReciprocalLatticeVector method) U unique() (diffsims.crystallography.ReciprocalLatticePoint method) (diffsims.crystallography.ReciprocalLatticeVector method) unit (diffsims.crystallography.ReciprocalLatticeVector property) uvtw_to_uvw() (in module diffsims.utils.sim_utils) V vectorised_spherical_polars_to_cartesians() (in module diffsims.utils.vector_utils) VectorLibraryGenerator (class in diffsims.generators.library_generator) W with_direct_beam (diffsims.libraries.diffraction_library.DiffractionLibrary attribute) X x (diffsims.crystallography.ReciprocalLatticeVector property) xyz (diffsims.crystallography.ReciprocalLatticeVector property) Y y (diffsims.crystallography.ReciprocalLatticeVector property) Z z (diffsims.crystallography.ReciprocalLatticeVector property)